Current Projects

 

The SeaDoc Society funds and conducts important scientific research that helps shape future management and policy decisions in the Salish Sea. It is a crucial part of what we do, and we’re deeply thankful for the donor support that makes this work possible. Browse some of our current research projects below.

 

San Juan County Eelgrass mapping & Conservation

Led by Tina Whitman, Friends of the San Juans.
Collaborators include the
Washington Department of Natural Resources, Cornell University, and University of Washington Friday Harbor Labs 

Declines in native eelgrass (Zostera marina) beds in San Juan County is a big conservation concern. This species provides numerous ecosystem services including habitat, biodiversity, better water quality, and coastal protection. Monitoring in this area is limited as is our understanding of factors that might be causing declines. With warming temperatures, exacerbation of eelgrass wasting disease is thought to be one of the potential contributing factors. 

This project will survey eelgrass meadows to expand upon existing knowledge of their distribution and to sample for disease from a subset of sites in hopes to identify eelgrass conservation priorities and to determine if disease is an indicator for climate resiliency.  

Photo by Bob Friel

assessment of the commercial Dungeness Crab fishery within the traditional Tsawout First Nation Indigenous Protected and Conserved Area

Led by Lais Chaves, Tsawout First Nation 
Collaborators include UBC Centre for Indigenous Fisheries

The Tsawout First Nation is concerned about the large spatial scale at which the Department of Fisheries and Oceans Canada currently manages this Dungeness crab. With the lead of a UBC MSc student, the Tsawout First Nation, the University of British Columbia Centre for Indigenous Fisheries, and the Hakai Institute will use modified commercial crab traps to assess the abundance, size range, and spatial distribution of adult Dungenesss crab within the QEN’T Indigenous Protected and Conserved Area. 

They also will try to determine if megalopae abundance is a good predictor of commercial landings. The graduate student and Tsawout youth interns will conduct a comprehensive systematic literature review, including searches of Western academic journals and Tsawout’s archive of community interviews and records to critically assess how narratives about Dungeness crab impact human interactions with them. 

Finally, they plan to conduct a series of semi-structured interviews that culminate in a comprehensive traditional knowledge study. The knowledge shared through these interviews will create essential understandings of Dungeness crab through the lens of Tsawout’s laws, worldviews, and culture and will, in turn, foundationally inform culturally guided stewardship protocols and recommendations for the QEN’T Indigenous Protected and Conserved Area. 

Photo by VIU DeepBay

Testing susceptibility of cockles to transmissible cancer after transplantation into an exposed region

Led by Michael Metzger, Pacific Northwest Research Institute
Collaborators include
Washington Department of Fish and Wildlife, Suquamish Tribe, Puget Sound Restoration Fund

This study proposes to investigate a potential cause for declines in Basket cockles (Clinocardium nuttallii), which are an important part of the diet and culture of the Suquamish Tribe and many other coastal tribes from Washington to Alaska. They will specifically test for a transmissible cancer called disseminated neoplasia or bivalve transmissible neoplasia, which has affected transplanted cockles at several sites in Puget Sound, complicating recovery. 

Researchers propose to transplant cockles from a site where the cancer is believed to NOT exist to a site on the Suquamish Reservation where it does exist. They will look at survival and transplanted cockles will be measured after two months of exposure at the new site. They will non-lethally extract hemolymph from a subset and will use histological and qPCR methods to determine the prevalence of disease. This will determine whether the prevalence of disease and disease progression suggest that the cockles are more susceptible to disease than endogenous cockles or cockles from other locations in Puget Sound. The results will greatly benefit future cockle restoration work.

Photo by Joe Gaydos

A novel genetics panel to inform management and restoration of native Olympia oyster

Led by Ryan Crim, Puget Sound Restoration Fund
Collaborators include
WashingtonDepartment of Fish and Wildlife, NOAA, University of Maryland

Olympia oyster restoration has faced challenges due to gaps in genetic data related to wild population structure and captive breeding protocols. Understanding the relationship between broodstock size and genetic diversity in offspring would enable us to ground hatchery practices in scientific data and improve efficiency. The researchers plan to use an archive of Olympia oyster samples to develop 500 species-specific SNP genetic markers. These markers will be used to genotype 2,100 oysters from Puget Sound, identifying sub-populations and determining the optimal broodstock numbers needed for spawning to manage genetic risks associated with hatchery production. This will help assess if current broodstock collection practices maintain genetic diversity while preserving the genetic structure and improve WDFW regulations for oyster restoration.

Photo by Julieta Martinelli

Photo by Julieta Martinelli

Shell Boring Worms and Olympia Oysters

Led by Chelsea Wood, University of Washington School of Aquatic and Fishery Sciences
Collaborators include
Washington State Department of Fish and Wildlife, Puget Sound Restoration Fund, Washington Sea Grant

Olympia oysters, our only native oyster in the Salish Sea, is a species of concern. This work will determine if a recently discovered shell-boring worm is a threat to Olympia oyster recovery. If so, this will be key information for modifying the current Olympia Oyster restoration plan. Read more in our blog.

By Eli Wolpin

By Eli Wolpin

Increasing volunteer monitoring of fish and invertebrates in the Salish Sea

Led by Janna Nichols, with REEF Environmental Education Foundation
Collaborators include the SeaDoc Society

This citizen science monitoring program uses trained SCUBA divers to collect data on the presence and abundance of fish and a big suite of marine invertebrates. It provides essential data on the decline or recovery of important species of concern like rockfish and abalone. It also helps gather data on species that are not regularly monitored, but could become scarce. For example, data from this monitoring work helped us understand which species of sea stars were susceptible to the devastating sea star wasting disease and to monitor their recovery, or in the case of the giant sunflower star, lack of recovery.

Individual divers collect data every time they go for a recreational dive. To collect annual pulses of high quality and high quantity data, every fall, a highly trained team of volunteer divers conduct 100 or more surveys in the San Juan and Gulf Islands. Data are available freely to the public online. You can join for free and contribute to this project. Snorkelers, free divers and scuba divers are all welcome to participate.

Cathleen-Wilson-herring.jpeg

Habitat use and Recovery Techniques for Herring

Led by Long Live the Kings
Collaborators include the
Nisqually Indian Tribe, Port Gamble S’Klallam Tribe, Washington Department of Fish and Wildlife, University of Washington.

Herring are economically and culturally important and provide food for fish, birds and marine mammals throughout the Salish Sea, but many herring stocks are not doing well. This collaborative project will test different herring recovery tools adapted from indigenous practices to help find ways to support or improve herring spawn (laying of eggs).

Photo by Florian Graner

Photo by Florian Graner

Hatchery Salmonids and Migration

Led by Andrew Berdahl, University of Washington School of Aquatic and Fishery Sciences
Collaborators include the
Washington Department of Fish and Wildlife.

The team is testing the “pied piper hypothesis.” Large releases of young salmon from hatcheries might alter the natural timing of young wild salmon and reduce their survival. This collaboration between academic and tribal and state co-managers will use 15-years of data to examine this influence, then test findings using experimental releases. Results could improve hatchery release timing to benefit wild salmon survival

Hook Size and Mortality Rates of Salmon

Led by Jonathan Scordino, Makah Fisheries Management.
Collaborators include Deon Roche, Makah Fisheries Management

Chinook salmon are a culturally and ecologically important fish and despite being protected under the Endangered Species Act, their population continues to decline. Coho salmon population also are declining. A potential mortality factor that could be minimized could be hook injuries from catch and release fishing of wild stocks. 

This project evaluates if hook size affects the location of injury as well as the probability of mortality for coho and Chinook salmon recreational catch and release troll fisheries. If hook size is an important component for the survival of coho and Chinook salmon caught and released the information will be used to discuss changes in recreational salmon fishing regulations. 

Photo by SeaDoc Society

Young of the Year Rockfish Habitat Identification

Led by Dayv Lowry and Adam Obaza, National Oceanic and Atmospheric Association
Collaborators include the SeaDoc Society,
REEF Environmental Education Foundation and numerous SCUBA clubs in the region

Rockfish hold their eggs inside their body until they hatch, and then give birth to live young. But they don’t give birth every year. Instead they have what scientists like to call jackpot recruitment, which means they produce a large amount of offspring on rare occasions. This sudden and unexpected burst of young helps ensure that not all of the babies get eaten by predators.

We do not have a good understanding on when they give birth and where the new baby fish, called recruits, go to mature. This study will help us better understand the type of ocean habitats that rockfish need to grow up and ultimately will help us identify areas that we need to protect to.

Photo by Janna Nichols

Refining survey Efforts for Rockfish Recovery

Led by Stena Troyer, Harbor WildWatch.
Collaborators include
Paua Marine Research Group and National Oceanic and Atmospheric Administration

We have learned substantial amounts about young-of-the-year (YOY) rockfish settlement patterns in the Salish Sea but still need to better understnd habitat use outside of daylight hours. This project will determine if there are differences in diel activity by surveying sites both during the day and at night. This study will help us better understand YOY recruitment and spatial use, and aid in their recovery. 

Surf scoter photo by cookierace

Modeling sea duck trends in the transboundary waters of the Salish Sea

Led by David Bradley, Birds Canada
Collaborators include
Puget Sound Bird Observatory, Washington Department of Fish and Wildlife, Environment and Climate Change Canada

Recognizing that transboundary monitoring of marine birds has been challenging and not always seamless, researchers propose to applying spatially explicit hierarchical analytical techniques in a Bayesian framework to assess transboundary trends of all waterbird species–including priority sea ducks–regularly monitored by two parallel citizen science programs in Canada (British Columbia Coastal Waterbird Survey: BCCWS) and the U.S. (Puget Sound Seabird Survey: PSSS). This will make the survey data freely available for agencies and other scientists to analyze and also will produce abundant information for the general public that will be visually displayed on Birds Canada’s NatureCounts web platform.

By Brian Guzzetti/Alaska Stock.

By Brian Guzzetti/Alaska Stock.

Tufted Puffin winter habitat mapping

Led by Joe Gaydos, The SeaDoc Society
Collaborators include the
University of Puget Sound, Washington Department of Fish and Wildlife, and the San Diego Zoo

Tufted Puffin populations have declined 77 percent in Washington State over the last century. As a result, the puffin was recently listed as Endangered by Washington State. Their decline is poorly understood, but one concern is that they could be suffering high mortality when they go out to the open ocean during the winter. Unfortunately, we have no idea where they spend the winter, making it difficult to determine if they could be getting caught in squid gillnets or suffer other mortality factors.

We are placing small solar-powered satellite transmitters on tufted puffins to track where they go at the end of the breeding season. This will give us data on winter movement, distribution and habitat use. This information will be crucial for recovery, as it will give insights into how potential at-sea factors such as changing oceanic and climatic conditions, changes in prey availability, and acute chemical contamination may interact with wintering puffin populations.

Photo by Govinda Rosling

ASsessing Threats to SEaBird Foraging Habitat

Led by Sarah Converse, University of Washington School of Aquatic and Fishery Sciences. Collaborators include Washington Department of Fish and Wildlife, University of Puget Sound, National Oceanic and Atmospheric Administration, and U.S. Fish and Wildlife Service

The Salish Sea is home to 172 different sea birds, including rhinoceros auklets and pigeon guillemots. Both are sentinel species for the Salish Sea however, we know very little about what they require for foraging habitat or what factors might impact their foraging conditions in the Salish Sea. This study will help us understand where and when they feed so that we can better protect them from potential threats including climate change, fishing bycatch, shipping disturbance, and oil spills.   

Mapping and Tracking Beavers in Tidal Marshes

Led by Gregory Hood, Skagit River System Cooperative.
Collaborators include the
Tulalip Tribes

Until recently, biologists did not know beavers were found in tidal wetlands. Scientists are becoming more aware that to improve the recovery of juvenile salmon in tidal wetlands, tidal shrub and forest wetlands also need to be restored. However, to do that well and completely, we need more information about the role beavers play in engineering in tidal wetlands.

This project provides critical baseline information on tidal beaver ecology by mapping beaver dams, lodges, and scent mounds with RTK-GPS technology and GPS tags. The information gathered will help guide future studies on beavers and their role in tidal wetlands. 

By John Lowman

By John Lowman

Large whale disentanglement

Led by James Powell, SR3
Collaborators include
Cascadia Research Collective, NOAA Fisheries, Fisheries and Oceans Canada, SeaDoc Society, and The Whale Museum

This project surveys for and documents large whales like humpbacks and gray whales that are entangled with fishing gear. Teams are trained to thoroughly document the entanglement and remove the gear. Like with the pinniped disentanglement project, detailed data on gear type is collected so that fishing practices can ultimately be modified to prevent this problem, which is not only a serious animal welfare issue, but also a population health concern in some species.

By David Hicks

By David Hicks

Pinniped Disentanglement

Led by Martin Haulena, Vancouver Aquarium
Collaborators include the SeaDoc Society,
SR3, NOAA Fisheries, Fisheries and Oceans Canada and the Whale Museum

This project surveys for and documents sea lions and harbor seals that are entangled with human products including packing straps and fishing gear. The goal is to sedate these animals and remove the gear, while collecting detailed data on what is causing the entanglements so that these items can be modified in the future to prevent this serious animal welfare issue.

By Gerry Tomasen

By Gerry Tomasen

Killer whale electronic medical records and health index

Led by Joe Gaydos, SeaDoc Society
Collaborators include the
National Marine Mammal Foundation, NOAA Fisheries, SeaWorld, Center for Whale Research, Fisheries and Oceans Canada, and many more

Detailed individual health records for killer whales not only help us understand the health of individual animals, a large database also helps to analyze trends for entire populations, compare health between populations or ecotypes, and evaluate factors that may contribute to disease.

Photo by Renee Chamberland

Killer Whale Diet Composition

Led by Melissa McKinney, McGill University.
Collaborators include
NOAA Northwest Fisheries Science Center.

Southern resident killer whales heavily rely on salmon, primarily Chinook salmon in their diet. Genetic analysis has revealed that other types of salmon and fish can be a part of their diet, but we don’t really know how much, which species, and when do they vary their diet. 

Better understanding diet is an important component for conserving the endangered southern resident killer whale population. This project will use sophisticated tools to help us understand and characterize the amount of food, as well as the specific prey species, they consume. The information could also reveal any seasonal or temporal trends that might exist, and help management make informed decisions on how to ensure enough food are available for this keystone species. 

Photo by Des Runyan

Killer Whale, Salmon, And Herring Responses to Vessel Noise: Mapping and Management Priorities

Led by Isabelle Côté, Simon Fraser University
Collaborators include
NOAA, University of Victoria, Dalhousie University, Cornell University, Simon Fraser University, Dept. of National Defense, World Wildlife Fund, Fisheries andOceans Canada, University of Florida

This project tackles the threat of underwater noise pollution in the Salish Sea by addressing data limitations on the prevalence of noise pollution, impacts on marine species, and a coherent risk management strategy. Specifically, the researchers propose to integrate underwater noise pollution maps with vessel noise dose-response curves for three culturally, economically, and ecologically important taxa: resident killer whales, Pacific salmon, and Pacific herring. Merging vessel noise maps and dose-response thresholds will identify locations where noise pollution exceeds species thresholds, the potential ecological impacts, and the primary polluters.

They will develop a strategy-to-regulation action plan by examining the political implications of results given the current state of the Canadian and American Ocean Noise Strategies, the United Nations Declaration on the Rights of Indigenous Peoples, the American Endangered Species Act, and the Canadian Species at Risk Act.